Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819123.1_cds_XP_016499965.1_13836
CDS Infomation

[gene=LOC107818452] [db_xref=GeneID:107818452] [protein=threonine synthase, chloroplastic-like] [protein_id=XP_016499965.1] [location=complement(join(12778..14113,14962..15203))] [gbkey=CDS]
Sequence

ATGGCGGCTTCTTCAACTTGCATGTTCAGATCCTCTTTCTTCTCTCCCAATCCCTATTCA
AAGCAACAATCTCCTGCTAAATCTAACGGCATTCACTTCTTCACTCCTATTAAAGCCACA
GCTTCTTCTACGGATGATGCAATCTCCGCATCTACACAACCTCAAAAACACCGACGCCCT
GCTGACGAGAACATCCGTGAGGAAGCCCGCCGCCACATCTCTTCCCACAATTTCTCTGCC
AGGTATGTGCCTTTTAATGCTGATCCTAACTCCAGTGAGTGGTATTCTCTCGACGAGATC
ATTTACCGCAGCCGCTCCGGTGGCCTACTTGATGTCCAACATGATATGGATGCTCTCAAG
AAGTTTGATGGCCAGTACTGGCGCTCCCTGTTTGATTCCCGGGTGGGCAAGACCACTTGG
CCTTATGGTTCTGGTGTTTGGTCCAAGAAGGAATGGGTCCTACCTGAAATTGACAGTGAT
GATATTGTCAGTGCTTTTGAAGGAAATTCCAATCTTTTTTGGGCTGAGCGTTTCGGCAAA
CAGTTCCTTGGCATGAGTGATTTGTGGGTCAAACATTGTGGAATCAGCCACACTGGTAGC
TTTAAGGATCTTGGCATGACTGTACTGGTGAGTCAAGTAAATCGGTTGCGGAAAATGCAT
AAACCAGTCGTGGGTGTCGGCTGTGCTTCCACTGGAGACACGTCAGCTGCACTGTCGGCT
TACTGCGCATCTGCAGGCATCCCATCAATTGTATTCTTACCTGCAAATAAGATTTCTATG
GCGCAACTTGTTCAACCAATAGCCAATGGGGCTTTTGTGTTGAGTCTTGACACTGATTTT
GATGGATGCATGCAGTTGATTCGCGAAGTCACAGCTGAGTTGCCCATTTACTTGGCAAAT
TCCTTGAATAGTTTGAGGCTAGAAGGGCAAAAGACGGCAGCTATAGAGATTCTGCAGCAG
TTTGACTGGGAAGTTCCTGATTGGGTGATAATTCCTGGTGGAAACCTGGGCAATATATAT
GCATTTTATAAAGGTTTTCAAATGTGCAAGGAGTTGGGACTTGTTGATCGTATCCCGAGA
CTTGTTTGTGCTCAAGCAGCCAATGCAAATCCACTTTACTTGCATTATAAATCTGGCTGG
AAAGAATTCAAATCTGTCAAGGCAAATACAACATTTGCATCTGCTATACAGATTGGTGAC
CCTGTATCTATCGATAGGGCTGTTTATGCTCTGAAGAACTCCAATGGGATAGTGGAGGAG
GCAACTGAGGAAGAGTTGATGGATGCAATGGCTCAGGCGGATTCAACTGGGATGTTCATA
TGCCCCCACACTGGTGTGGCATTGACAGCTCTATCCAAGCTGAGAAAGACGGGGGTTATT
AGGCCAACTGATAGGACCGTGGTTGTGAGTACAGCTCATGGGTTGAAGTTTACTCAATCC
AAGGTTGATTATCATTCAAAAGAAATAAAGAACATGGAGTGCCGGTTTGCTAATCCACCA
GTGCAGGTGAAAGCAGACTTCGGATCAGTCATGGATGTTCTCAAGAAATATCTATTGAGC
AAAAATTCCAAGTTCTAA

Peptide Sequence

PEP ID

XP_016499965.1
PEP Infomation

PREDICTED: threonine synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAASSTCMFRSSFFSPNPYSKQQSPAKSNGIHFFTPIKATASSTDDAISASTQPQKHRRP
ADENIREEARRHISSHNFSARYVPFNADPNSSEWYSLDEIIYRSRSGGLLDVQHDMDALK
KFDGQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGK
QFLGMSDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSA
YCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSLDTDFDGCMQLIREVTAELPIYLAN
SLNSLRLEGQKTAAIEILQQFDWEVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDRIPR
LVCAQAANANPLYLHYKSGWKEFKSVKANTTFASAIQIGDPVSIDRAVYALKNSNGIVEE
ATEEELMDAMAQADSTGMFICPHTGVALTALSKLRKTGVIRPTDRTVVVSTAHGLKFTQS
KVDYHSKEIKNMECRFANPPVQVKADFGSVMDVLKKYLLSKNSKF

Transcript Sequence

Gene sequence data has not been registered.